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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs35899541 chr2:99732825 GA/G TSGA10 chr2:99613724-99771427:- 0.55 5.37 1.85E-6 Box Plot
ACC rs35933605 chr16:50399082 A/AG CYLD chr16:50775961-50835846:+ 0.55 5.15 4.1E-6 Box Plot
ACC rs35939580 chr17:62973078 G/A AMZ2P1 chr17:62962668-62971694:- 1.03 5.05 5.82E-6 Box Plot
ACC rs35950761 chr7:97326751 T/C SHFM1 chr7:96125596-96339203:- 0.81 5.05 5.75E-6 Box Plot
ACC rs35954749 chr8:71633778 T/C XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs35960104 chr8:71864341 G/GA XKR9 chr8:71581600-71702606:+ 0.67 6.77 1.17E-8 Box Plot
ACC rs35960437 chr8:71661960 C/G XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs35983137 chr1:213056141 C/CT LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs36019623 chr1:63925241 A/T ITGB3BP chr1:63906441-64059392:- 0.55 5.93 2.48E-7 Box Plot
ACC rs36051332 chr20:44418011 G/A WFDC3 chr20:44376583-44420571:- 0.88 6.12 1.26E-7 Box Plot
ACC rs36062488 chr17:41337472 C/T NBR2 chr17:41277627-41305688:+ 0.93 7.55 6.48E-10 Box Plot
ACC rs36071868 chr2:99737120 G/A TSGA10 chr2:99613724-99771427:- 0.55 5.37 1.85E-6 Box Plot
ACC rs36076129 chr7:97402843 T/C TECPR1 chr7:97843936-97881563:- 0.72 5.44 1.45E-6 Box Plot
ACC rs36114301 chr14:64390195 T/C SYNE2 chr14:64319701-64693151:+ 1.01 5.25 2.85E-6 Box Plot
ACC rs36200097 chr7:97410027 G/A TECPR1 chr7:97843936-97881563:- 0.73 5.25 2.85E-6 Box Plot